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Cortexa research tool·structure·ensembl_map
EnsemblMap Convert Coordinates
Convert genomic coordinates between human genome assemblies (e.g., GRCh37/hg19 to GRCh38/hg38 or vice versa). Essential for migrating variant positions, GWAS loci, or BED intervals between assembly versions. Uses the Ensembl REST API assembly mapping endpoint. Example: converting BRAF V600E position chr7:140453136 from GRCh37 maps to chr7:140753336 in GRCh38. Supports any species with multiple assemblies.
AvailableCortexa
Schema
JSON Schema the agent (or your API call) must match.
JSON · 36 lines · 976 chars
Examples (1)
Default EnsemblMap Convert Coordinates call
public-safeinput
JSON · 7 lines · 98 chars
Expected response keys: success
Anonymous-safe example. Rate-limited; no sign-in required.
Identifiers
- Catalog ID
- tu_EnsemblMap_convert_coordinates
- Tool name
- EnsemblMap_convert_coordinates
- Added
- 2026-04-30 22:47Z
- Tags
- tooluniverse