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Research tool·biomedical·gtdb
GTDB Get Species
Get detailed information about a GTDB species cluster, including all genomes assigned to that species. A GTDB species cluster groups genomes by average nucleotide identity (ANI). Returns the full list of genomes with their accessions, NCBI organism names, NCBI taxonomy, and whether they are the GTDB species representative or NCBI type material. Useful for exploring species diversity, finding representative genomes, and comparing GTDB vs NCBI classifications.
AvailableCortexa
Schema
JSON Schema the agent (or your API call) must match.
View JSON schemaExpandCollapse
JSON · 24 lines · 610 chars
Examples (1)
Default GTDB Get Species call
Public-safe example · rate-limited
JSON input · 5 lines · 85 chars
Expected response keys: success
Identifiers
- Catalog ID
- tu_GTDB_get_species
- Tool name
- GTDB_get_species
- Added
- 2026-04-30 22:47Z
- Tags
- tooluniverse