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Cortexa research tool·biomedical·gtdb

GTDB Get Species

Get detailed information about a GTDB species cluster, including all genomes assigned to that species. A GTDB species cluster groups genomes by average nucleotide identity (ANI). Returns the full list of genomes with their accessions, NCBI organism names, NCBI taxonomy, and whether they are the GTDB species representative or NCBI type material. Useful for exploring species diversity, finding representative genomes, and comparing GTDB vs NCBI classifications.

AvailableCortexa

Schema

JSON Schema the agent (or your API call) must match.

JSON · 24 lines · 610 chars

Examples (1)

Default GTDB Get Species call

public-safeinput
JSON · 5 lines · 58 chars
Expected response keys: success

Anonymous-safe example. Rate-limited; no sign-in required.

Identifiers

Catalog ID
tu_GTDB_get_species
Tool name
GTDB_get_species
Added
2026-04-30 22:47Z
Tags
tooluniverse
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