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Cortexa research tool·structure·pdbe_sifts

PDBeSIFTS Get PDB To Uniprot

Map PDB entry chains to UniProt protein accessions using PDBe SIFTS cross-referencing. For a given PDB structure, returns which UniProt proteins are present, which chains correspond to each protein, and the residue-level mapping between PDB and UniProt numbering. Essential for understanding multi-chain structures and identifying proteins in crystal/EM structures. Example: PDB 1tup maps chain A/B/C to P04637 (TP53) residues 94-312.

AvailableCortexa

Schema

JSON Schema the agent (or your API call) must match.

JSON · 12 lines · 281 chars

Examples (1)

Default PDBeSIFTS Get PDB To Uniprot call

public-safeinput
JSON · 3 lines · 22 chars
Expected response keys: success

Anonymous-safe example. Rate-limited; no sign-in required.

Identifiers

Catalog ID
tu_PDBeSIFTS_get_pdb_to_uniprot
Tool name
PDBeSIFTS_get_pdb_to_uniprot
Added
2026-04-30 22:47Z
Tags
tooluniverse
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