GProfiler Annotate Snps
Map SNP rsIDs to genes and annotate their functional consequences using g:Profiler (g:SNPense) from the University of Tartu. Given a list of SNP rsIDs, returns the chromosome, position, strand, associated Ensembl gene IDs, gene names, and predicted variant consequences (missense_variant, synonymous_variant, intron_variant, etc.) with counts. Useful for annotating GWAS hits, linking variants to genes, or understanding the functional impact of SNPs. Example: 'rs11540652' maps to chromosome 17 pos…
Overview
Map SNP rsIDs to genes and annotate their functional consequences using g:Profiler (g:SNPense) from the University of Tartu. Given a list of SNP rsIDs, returns the chromosome, position, strand, associated Ensembl gene IDs, gene names, and predicted variant consequences (missense_variant, synonymous_variant, intron_variant, etc.) with counts. Useful for annotating GWAS hits, linking variants to genes, or understanding the functional impact of SNPs. Example: 'rs11540652' maps to chromosome 17 position 7674220, gene TP53 (ENSG00000141510), with 18 missense variant consequences; 'rs429358' maps to APOE on chromosome 19.
Schema
JSON Schema the agent (or your API call) must match.
Examples (1)
Default GProfiler Annotate Snps call
Anonymous-safe example. Rate-limited; no sign-in required.
Identifiers
- Catalog ID
- tu_gProfiler_annotate_snps
- Tool name
- gProfiler_annotate_snps
- Added
- 2026-04-30 22:47Z
- Tags
- tooluniverse