Cortexa research tool·genomics·gnomad

Gnomad Get Region

Get basic regional information from gnomAD by genomic interval. Returns genes overlapping the region and a list of `variant_id` values in the region for the selected dataset. Use those IDs with `gnomad_get_variant`. Keep regions small to avoid large payloads.

Livelast probed 2026-05-01 01:00Z· 257msCortexa

Status

The most recent probe succeeded. Safe to call from the agent today.

Last probed: 1d ago
Last success: 1d ago
Last latency: 257ms

Schema

JSON Schema the agent (or your API call) must match.

{
  "properties": {
    "chrom": {
      "description": "Chromosome (e.g., '19').",
      "type": "string"
    },
    "dataset": {
      "default": "gnomad_r3",
      "description": "gnomAD dataset ID used for `variants(dataset: ...)`. Allowed values: gnomad_r4, gnomad_r4_non_ukb, gnomad_r3, gnomad_r3_controls_and_biobanks, gnomad_r3_non_cancer, gnomad_r3_non_neuro, gnomad_r3_non_topmed, gnomad_r3_non_v2, gnomad_r2_1, gnomad_r2_1_controls, gnomad_r2_1_non_neuro, gnomad_r2_1_non_cancer, gnomad_r2_1_non_topmed, exac.",
      "type": "string"
    },
    "reference_genome": {
      "default": "GRCh38",
      "description": "Reference genome.",
      "enum": [
        "GRCh37",
        "GRCh38"
      ],
      "type": "string"
    },
    "start": {
      "description": "1-based start position.",
      "type": "integer"
    },
    "stop": {
      "description": "1-based stop position.",
      "type": "integer"
    }
  },
  "required": [
    "chrom",
    "start",
    "stop"
  ],
  "type": "object"
}

Examples (1)

Default Gnomad Get Region call

public-safeinput

{
  "chrom": "",
  "start": 1,
  "stop": 1
}

Expected response keys: success

Anonymous-safe example. Rate-limited; no sign-in required.

Identifiers

Catalog ID: tu_gnomad_get_region
Tool name: gnomad_get_region
Added: 2026-05-01 00:58Z
Tags: tooluniverse

Gnomad Get Region

Livelast probed 2026-05-01 01:00Z· 257msCortexa

Schema

JSON Schema the agent (or your API call) must match.

{ "properties": { "chrom": { "description": "Chromosome (e.g., '19').", "type": "string" }, "dataset": { "default": "gnomad_r3", "description": "gnomAD dataset ID used for `variants(dataset: ...)`. Allowed values: gnomad_r4, gnomad_r4_non_ukb, gnomad_r3, gnomad_r3_controls_and_biobanks, gnomad_r3_non_cancer, gnomad_r3_non_neuro, gnomad_r3_non_topmed, gnomad_r3_non_v2, gnomad_r2_1, gnomad_r2_1_controls, gnomad_r2_1_non_neuro, gnomad_r2_1_non_cancer, gnomad_r2_1_non_topmed, exac.", "type": "string" }, "reference_genome": { "default": "GRCh38", "description": "Reference genome.", "enum": [ "GRCh37", "GRCh38" ], "type": "string" }, "start": { "description": "1-based start position.", "type": "integer" }, "stop": { "description": "1-based stop position.", "type": "integer" } }, "required": [ "chrom", "start", "stop" ], "type": "object" }