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Cortexa research tool·genomics·archs4

ARCHS4 Get Gene Expression

Get gene expression levels across human or mouse tissues and cell lines from ARCHS4 (All RNA-seq and ChIP-seq Sample and Signature Search). Returns box-plot statistics (min, Q1, median, Q3, max) in log2(TPM+1) units for each tissue/cell line, computed from 300K+ uniformly processed RNA-seq samples. Choose type='tissue' for organ/tissue expression or type='cellline' for cell line expression. Results are sorted by median expression (highest first).

AvailableCortexa

Schema

JSON Schema the agent (or your API call) must match.

JSON · 38 lines · 719 chars

Examples (1)

Default ARCHS4 Get Gene Expression call

public-safeinput
JSON · 3 lines · 21 chars
Expected response keys: success

Anonymous-safe example. Rate-limited; no sign-in required.

Identifiers

Catalog ID
tu_ARCHS4_get_gene_expression
Tool name
ARCHS4_get_gene_expression
Added
2026-04-30 22:47Z
Tags
tooluniverse
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