Cortexa research tool·genomics·bigg_models

BiGG List Models

Get list of all genome-scale metabolic models in BiGG database (85+ models). Returns model IDs, organisms, reaction counts, metabolite counts, and gene counts for bacteria, archaea, and eukaryotes. Models cover E. coli, yeast, human, and other organisms. Use for: discovering available models, finding organism-specific models, comparing model sizes, metabolic modeling projects. Essential first step for flux balance analysis.

Livelast probed 2026-04-30 23:07Z· 98msCortexa

Status

The most recent probe succeeded. Safe to call from the agent today.

Last probed: 1d ago
Last success: 1d ago
Last latency: 98ms

Schema

JSON Schema the agent (or your API call) must match.

{
  "properties": {
    "operation": {
      "description": "Operation type",
      "enum": [
        "list_models"
      ],
      "type": "string"
    }
  },
  "required": [
    "operation"
  ],
  "type": "object"
}

Examples (1)

Default BiGG List Models call

public-safeinput

{
  "operation": ""
}

Expected response keys: success

Anonymous-safe example. Rate-limited; no sign-in required.

Identifiers

Catalog ID: tu_BiGG_list_models
Tool name: BiGG_list_models
Added: 2026-04-30 22:47Z
Tags: tooluniverse

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