Cortexa research tool·structure·bindingdb

BindingDB Get Targets By Compound

Find protein targets for a compound by SMILES structure. Returns proteins with binding affinity data for similar compounds. Essential for polypharmacology analysis and off-target prediction.

Livelast probed 2026-04-30 23:07Z· 84msCortexa

Status

The most recent probe succeeded. Safe to call from the agent today.

Last probed: 1d ago
Last success: 1d ago
Last latency: 84ms

Schema

JSON Schema the agent (or your API call) must match.

{
  "properties": {
    "similarity_cutoff": {
      "default": 0.85,
      "description": "Similarity threshold 0-1 (default: 0.85)",
      "type": "number"
    },
    "smiles": {
      "description": "SMILES structure of compound",
      "type": "string"
    }
  },
  "required": [
    "smiles"
  ],
  "type": "object"
}

Examples (1)

Default BindingDB Get Targets By Compound call

public-safeinput

{
  "similarity_cutoff": 1,
  "smiles": "CC(=O)Oc1ccccc1C(=O)O"
}

Expected response keys: success

Anonymous-safe example. Rate-limited; no sign-in required.

Identifiers

Catalog ID: tu_BindingDB_get_targets_by_compound
Tool name: BindingDB_get_targets_by_compound
Added: 2026-04-30 22:47Z
Tags: tooluniverse

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