BioImageArchive List Study Files
List the file/image manifest of a BioImage Archive study, giving per-file download paths and per-image experimental annotations. Unlike BioImageArchive_get_study (which returns study-level metadata), this returns the actual files: image Name, relative download path (append to the study's FTP/HTTPS root), file size, and any annotation columns the submitters attached to each image (e.g. staining, cells, treatment, channels, timepoint). Use limit/offset to page through large manifests; metadata.re…
Overview
List the file/image manifest of a BioImage Archive study, giving per-file download paths and per-image experimental annotations. Unlike BioImageArchive_get_study (which returns study-level metadata), this returns the actual files: image Name, relative download path (append to the study's FTP/HTTPS root), file size, and any annotation columns the submitters attached to each image (e.g. staining, cells, treatment, channels, timepoint). Use limit/offset to page through large manifests; metadata.records_total gives the full file count. Example: S-BIAD144 has 223 files; the first is 'experimentA_01_WT_PDMP.czi' (path experiments/experimentA_01_WT_PDMP.czi) with annotations staining='click chemistry and IF', cells='WT', treatment='20 uM PDMP', Channel_1='pacSph', Channel_2='Lamp1'.
Schema
JSON Schema the agent (or your API call) must match.
Examples (1)
Default BioImageArchive List Study Files call
Anonymous-safe example. Rate-limited; no sign-in required.
Identifiers
- Catalog ID
- tu_BioImageArchive_list_study_files
- Tool name
- BioImageArchive_list_study_files
- Added
- 2026-07-29 18:13Z
- Tags
- tooluniverse