BridgeDb Xrefs
Map a biological identifier across databases using BridgeDb. Given an identifier from one database (e.g., HMDB0000122 from HMDB), returns equivalent identifiers in all other supported databases (ChEBI, KEGG, PubChem, Wikidata, CAS, etc.). Supports genes, proteins, metabolites, and other biological entities across 45+ databases and 30+ organisms. System codes: Ch=HMDB, Ce=ChEBI, Ck=KEGG Compound, En=Ensembl, H=HGNC, S=UniProt, L=NCBI Gene, Cpc=PubChem-compound, Ik=InChIKey. Use this when you nee…
Overview
Map a biological identifier across databases using BridgeDb. Given an identifier from one database (e.g., HMDB0000122 from HMDB), returns equivalent identifiers in all other supported databases (ChEBI, KEGG, PubChem, Wikidata, CAS, etc.). Supports genes, proteins, metabolites, and other biological entities across 45+ databases and 30+ organisms. System codes: Ch=HMDB, Ce=ChEBI, Ck=KEGG Compound, En=Ensembl, H=HGNC, S=UniProt, L=NCBI Gene, Cpc=PubChem-compound, Ik=InChIKey. Use this when you need to convert between database identifiers for the same biological entity.
Schema
JSON Schema the agent (or your API call) must match.
Examples (1)
Default BridgeDb Xrefs call
Anonymous-safe example. Rate-limited; no sign-in required.
Identifiers
- Catalog ID
- tu_BridgeDb_xrefs
- Tool name
- BridgeDb_xrefs
- Added
- 2026-04-30 22:47Z
- Tags
- tooluniverse