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Cortexa research tool·biomedical·cellxgene_census
CELLxGENE Get Embeddings
Access pre-calculated cell embeddings (scVI, Geneformer) from CELLxGENE Census. Returns available embedding names or specific embedding data. Embeddings enable rapid visualization and analysis without recomputation. Use for: UMAP/t-SNE visualization, cell similarity analysis, transfer learning.
AvailableCortexa
Schema
JSON Schema the agent (or your API call) must match.
JSON · 34 lines · 918 chars
Examples (1)
Default CELLxGENE Get Embeddings call
public-safeinput
JSON · 3 lines · 21 chars
Expected response keys: success
Anonymous-safe example. Rate-limited; no sign-in required.
Identifiers
- Catalog ID
- tu_CELLxGENE_get_embeddings
- Tool name
- CELLxGENE_get_embeddings
- Added
- 2026-04-30 22:47Z
- Tags
- tooluniverse