CancerVar Classify Variant
Classify a somatic cancer variant using AMP/ASCO/CAP 2017 guidelines (CancerVar). Returns a Tier I–IV assignment: Tier I = Strong Clinical Significance (FDA-approved therapy association), Tier II = Potential Clinical Significance (investigational/preclinical evidence), Tier III = Unknown Clinical Significance, Tier IV = Benign/Likely Benign. Also returns 12 CBP evidence scores and an Oncogenicity Pathogenicity Index (OPAI, 0–1). Input requires genomic coordinates in hg19 or hg38. No API key nee…
Overview
Classify a somatic cancer variant using AMP/ASCO/CAP 2017 guidelines (CancerVar). Returns a Tier I–IV assignment: Tier I = Strong Clinical Significance (FDA-approved therapy association), Tier II = Potential Clinical Significance (investigational/preclinical evidence), Tier III = Unknown Clinical Significance, Tier IV = Benign/Likely Benign. Also returns 12 CBP evidence scores and an Oncogenicity Pathogenicity Index (OPAI, 0–1). Input requires genomic coordinates in hg19 or hg38. No API key needed. Example: BRAF V600E (chr7:140453136 A>T hg19) is Tier I (strong) with OPAI=0.99.
Schema
JSON Schema the agent (or your API call) must match.
Examples (1)
Default CancerVar Classify Variant call
Anonymous-safe example. Rate-limited; no sign-in required.
Identifiers
- Catalog ID
- tu_CancerVar_classify_variant
- Tool name
- CancerVar_classify_variant
- Added
- 2026-04-30 22:47Z
- Tags
- tooluniverse