Cortexa research tool·genomics·chipatlas

ChIPAtlas Get Experiments

Search ChIP-Atlas experiment metadata including experiment IDs, antigens, cell types, and processing statistics. Filter by genome, antigen (TF/histone), or cell type. Returns experiment details with SRX/ERX/DRX IDs. Use for: finding relevant experiments, getting experiment metadata, dataset discovery, batch analysis planning.

Livelast probed 2026-05-01 01:00Z· 113msCortexa

Status

The most recent probe succeeded. Safe to call from the agent today.

Last probed: 1d ago
Last success: 1d ago
Last latency: 113ms

Schema

JSON Schema the agent (or your API call) must match.

{
  "properties": {
    "antigen": {
      "description": "Filter by antigen/protein name (e.g., 'CTCF', 'H3K4me3')",
      "type": "string"
    },
    "cell_type": {
      "description": "Filter by cell type (e.g., 'K-562', 'HepG2', 'CD4')",
      "type": "string"
    },
    "genome": {
      "description": "Filter by genome assembly",
      "enum": [
        "hg38",
        "hg19",
        "mm10",
        "mm9",
        "rn6",
        "dm6",
        "dm3",
        "ce11",
        "ce10",
        "sacCer3"
      ],
      "type": "string"
    },
    "limit": {
      "default": 100,
      "description": "Maximum results to return",
      "maximum": 1000,
      "minimum": 1,
      "type": "integer"
    },
    "operation": {
      "default": "get_experiment_list",
      "enum": [
        "get_experiment_list"
      ],
      "type": "string"
    }
  },
  "required": [],
  "type": "object"
}

Examples (1)

Default ChIPAtlas Get Experiments call

public-safeinput

{
  "limit": 3
}

Expected response keys: success

Anonymous-safe example. Rate-limited; no sign-in required.

Identifiers

Catalog ID: tu_ChIPAtlas_get_experiments
Tool name: ChIPAtlas_get_experiments
Added: 2026-05-01 00:58Z
Tags: tooluniverse

ChIPAtlas Get Experiments

Livelast probed 2026-05-01 01:00Z· 113msCortexa

Schema

JSON Schema the agent (or your API call) must match.

{ "properties": { "antigen": { "description": "Filter by antigen/protein name (e.g., 'CTCF', 'H3K4me3')", "type": "string" }, "cell_type": { "description": "Filter by cell type (e.g., 'K-562', 'HepG2', 'CD4')", "type": "string" }, "genome": { "description": "Filter by genome assembly", "enum": [ "hg38", "hg19", "mm10", "mm9", "rn6", "dm6", "dm3", "ce11", "ce10", "sacCer3" ], "type": "string" }, "limit": { "default": 100, "description": "Maximum results to return", "maximum": 1000, "minimum": 1, "type": "integer" }, "operation": { "default": "get_experiment_list", "enum": [ "get_experiment_list" ], "type": "string" } }, "required": [], "type": "object" }