ChannelsDB Get Channels Cofactor
Get cofactor access tunnel data for a PDB structure from ChannelsDB. Specifically detects tunnels that provide access pathways for cofactors and small molecules to reach enzyme active sites or binding pockets. Each channel includes geometric profile data (radius along the path, 3D coordinates), physicochemical properties (charge, hydrophobicity, polarity), and the residue layers that line the tunnel. Use ChannelsDB_get_channels_pdb for a complete view of all channel types including transmembran…
Overview
Get cofactor access tunnel data for a PDB structure from ChannelsDB. Specifically detects tunnels that provide access pathways for cofactors and small molecules to reach enzyme active sites or binding pockets. Each channel includes geometric profile data (radius along the path, 3D coordinates), physicochemical properties (charge, hydrophobicity, polarity), and the residue layers that line the tunnel. Use ChannelsDB_get_channels_pdb for a complete view of all channel types including transmembrane pores and reviewed channels.
Status
The most recent probe succeeded. Safe to call from the agent today.
- Last probed
- 1d ago
- Last success
- 1d ago
- Last latency
- 80ms
Schema
JSON Schema the agent (or your API call) must match.
{
"properties": {
"pdb_id": {
"description": "PDB structure identifier (4-character code). Examples: '5i6x' (MscL), '3sn6' (GPCR-Gs complex).",
"type": "string"
}
},
"required": [
"pdb_id"
],
"type": "object"
}Examples (1)
Default ChannelsDB Get Channels Cofactor call
{
"pdb_id": "1AKI"
}Anonymous-safe example. Rate-limited; no sign-in required.
Identifiers
- Catalog ID
- tu_ChannelsDB_get_channels_cofactor
- Tool name
- ChannelsDB_get_channels_cofactor
- Added
- 2026-04-30 22:47Z
- Tags
- tooluniverse