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Cortexa research tool·genomics·encode
ENCODE List Files
List ENCODE data files with filters by file format, output type, or assay. Returns file metadata including accessions, formats (FASTQ, BAM, bigWig), output types (alignments, peaks, signal), and file sizes. Use this to programmatically discover downloadable artifacts for specific experiments or data types. Find file accessions to use with ENCODE_get_file for detailed file information and download URLs.
AvailableCortexa
Schema
JSON Schema the agent (or your API call) must match.
JSON · 20 lines · 628 chars
Examples (1)
Default ENCODE List Files call
public-safeinput
JSON · 3 lines · 16 chars
Expected response keys: success
Anonymous-safe example. Rate-limited; no sign-in required.
Identifiers
- Catalog ID
- tu_ENCODE_list_files
- Tool name
- ENCODE_list_files
- Added
- 2026-05-01 00:58Z
- Tags
- tooluniverse