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Cortexa research tool·genomics·epigenomics

ENCODE Search Histone Experiments

Search ENCODE histone ChIP-seq experiments by histone modification mark, biosample, or organism. Returns experiment accessions, histone marks (H3K4me3, H3K27ac, H3K27me3, H3K36me3, H3K4me1, H3K9me3), biosample summaries, and metadata. Use this to find histone modification profiling data for specific marks or tissues. Common marks: H3K4me3 (active promoters), H3K27ac (active enhancers), H3K27me3 (polycomb repression), H3K4me1 (poised enhancers), H3K36me3 (gene bodies), H3K9me3 (heterochromatin).

AvailableCortexa

Schema

JSON Schema the agent (or your API call) must match.

JSON · 67 lines · 2,075 chars

Examples (1)

Default ENCODE Search Histone Experiments call

public-safeinput
JSON · 3 lines · 16 chars
Expected response keys: success

Anonymous-safe example. Rate-limited; no sign-in required.

Identifiers

Catalog ID
tu_ENCODE_search_histone_experiments
Tool name
ENCODE_search_histone_experiments
Added
2026-05-01 00:58Z
Tags
tooluniverse
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