ENCORI Get Degradome Cleavage
Retrieve miRNA cleavage sites validated by degradome-seq (PARE / Degradome) via ENCORI (starBase) degradomeRNA module: experimentally confirmed slicer cleavage of a target by a miRNA. Provide 'gene' (e.g. 'TP53') to get miRNAs that cleave it, or 'mirna' for a miRNA's cleavage targets. Each row reports the cleavage-event count, number of degradome experiments, degradome sites, total reads and category (I-IV signal confidence). NOTE: degradome data is built only for assembly 'hg19' (the default h…
Overview
Retrieve miRNA cleavage sites validated by degradome-seq (PARE / Degradome) via ENCORI (starBase) degradomeRNA module: experimentally confirmed slicer cleavage of a target by a miRNA. Provide 'gene' (e.g. 'TP53') to get miRNAs that cleave it, or 'mirna' for a miRNA's cleavage targets. Each row reports the cleavage-event count, number of degradome experiments, degradome sites, total reads and category (I-IV signal confidence). NOTE: degradome data is built only for assembly 'hg19' (the default here); hg38 returns nothing. Public, no authentication.
Schema
JSON Schema the agent (or your API call) must match.
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Examples (1)
Default ENCORI Get Degradome Cleavage call
Public-safe example · rate-limited
Identifiers
- Catalog ID
- tu_ENCORI_get_degradome_cleavage
- Tool name
- ENCORI_get_degradome_cleavage
- Added
- 2026-07-29 18:13Z
- Tags
- tooluniverse