Cortexa research tool·genomics·finngen

FinnGen Get Region Associations

Get regional association and fine-mapping credible set data for a FinnGen phenotype in a specific genomic region. Returns credible sets with lead variants, posterior probabilities, and minor allele frequencies. Use to examine GWAS signals at a specific locus for a Finnish population disease endpoint.

Livelast probed 2026-04-30 23:07Z· 116msCortexa

Status

The most recent probe succeeded. Safe to call from the agent today.

Last probed: 1d ago
Last success: 1d ago
Last latency: 116ms

Schema

JSON Schema the agent (or your API call) must match.

{
  "properties": {
    "phenocode": {
      "description": "FinnGen phenotype code (e.g., 'T2D', 'I9_CHD'). Get codes from FinnGen_list_phenotypes.",
      "type": "string"
    },
    "region": {
      "description": "Genomic region in chr:start-end format (GRCh38). Example: '9:22000000-22200000' for the CDKN2A/B locus on chromosome 9.",
      "type": "string"
    }
  },
  "required": [
    "phenocode",
    "region"
  ],
  "type": "object"
}

Examples (1)

Default FinnGen Get Region Associations call

public-safeinput

{
  "phenocode": "",
  "region": ""
}

Expected response keys: success

Anonymous-safe example. Rate-limited; no sign-in required.

Identifiers

Catalog ID: tu_FinnGen_get_region_associations
Tool name: FinnGen_get_region_associations
Added: 2026-04-30 22:47Z
Tags: tooluniverse

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