Cortexa research tool·clinical·gdc

GDC Get Clinical Data

Get detailed clinical data for cancer cases from NCI GDC/TCGA. Returns demographics (gender, race, vital_status, age_at_index), diagnoses (primary_diagnosis, tumor_stage, age_at_diagnosis, days_to_last_follow_up), and treatments (therapeutic_agents, treatment_type). Filter by project, primary_site, disease_type, or vital_status.

Livelast probed 2026-04-30 23:07Z· 323msCortexa

Status

The most recent probe succeeded. Safe to call from the agent today.

Last probed: 1d ago
Last success: 1d ago
Last latency: 323ms

Schema

JSON Schema the agent (or your API call) must match.

{
  "properties": {
    "disease_type": {
      "description": "Disease type filter (e.g., 'Ductal and Lobular Neoplasms')",
      "type": "string"
    },
    "gender": {
      "description": "Gender filter: 'female' or 'male'",
      "enum": [
        "female",
        "male"
      ],
      "type": "string"
    },
    "offset": {
      "default": 0,
      "description": "Pagination offset (0-based)",
      "minimum": 0,
      "type": "integer"
    },
    "primary_site": {
      "description": "Primary anatomical site (e.g., 'Breast', 'Lung', 'Brain')",
      "type": "string"
    },
    "project_id": {
      "description": "GDC project identifier (e.g., 'TCGA-BRCA', 'TCGA-LUAD', 'TARGET-AML')",
      "type": "string"
    },
    "size": {
      "default": 10,
      "description": "Number of cases to return (1-100)",
      "maximum": 100,
      "minimum": 1,
      "type": "integer"
    },
    "vital_status": {
      "description": "Vital status filter: 'Alive' or 'Dead'",
      "enum": [
        "Alive",
        "Dead"
      ],
      "type": "string"
    }
  },
  "type": "object"
}

Examples (1)

Default GDC Get Clinical Data call

public-safeinput

{
  "disease_type": "type 2 diabetes",
  "offset": 1,
  "size": 1
}

Expected response keys: success

Anonymous-safe example. Rate-limited; no sign-in required.

Identifiers

Catalog ID: tu_GDC_get_clinical_data
Tool name: GDC_get_clinical_data
Added: 2026-04-30 22:47Z
Tags: tooluniverse

GDC Get Clinical Data

Livelast probed 2026-04-30 23:07Z· 323msCortexa

Schema

JSON Schema the agent (or your API call) must match.

{ "properties": { "disease_type": { "description": "Disease type filter (e.g., 'Ductal and Lobular Neoplasms')", "type": "string" }, "gender": { "description": "Gender filter: 'female' or 'male'", "enum": [ "female", "male" ], "type": "string" }, "offset": { "default": 0, "description": "Pagination offset (0-based)", "minimum": 0, "type": "integer" }, "primary_site": { "description": "Primary anatomical site (e.g., 'Breast', 'Lung', 'Brain')", "type": "string" }, "project_id": { "description": "GDC project identifier (e.g., 'TCGA-BRCA', 'TCGA-LUAD', 'TARGET-AML')", "type": "string" }, "size": { "default": 10, "description": "Number of cases to return (1-100)", "maximum": 100, "minimum": 1, "type": "integer" }, "vital_status": { "description": "Vital status filter: 'Alive' or 'Dead'", "enum": [ "Alive", "Dead" ], "type": "string" } }, "type": "object" }