GTEx Calculate Eqtl
Calculate custom eQTL for any gene-variant pair in any tissue. Dynamically calculates gene-variant association statistics including p-value, normalized effect size (NES), t-statistic, and genotype data. Works for both significant and non-significant associations. Returns detailed statistics even if association not in precomputed results. Use for: testing specific hypotheses, custom variant-gene pairs, dynamic eQTL analysis, validating findings. Requires all three: gencode_id, variant_id, and ti…
Overview
Calculate custom eQTL for any gene-variant pair in any tissue. Dynamically calculates gene-variant association statistics including p-value, normalized effect size (NES), t-statistic, and genotype data. Works for both significant and non-significant associations. Returns detailed statistics even if association not in precomputed results. Use for: testing specific hypotheses, custom variant-gene pairs, dynamic eQTL analysis, validating findings. Requires all three: gencode_id, variant_id, and tissue_site_detail_id.
Schema
JSON Schema the agent (or your API call) must match.
Examples (1)
Default GTEx Calculate Eqtl call
Anonymous-safe example. Rate-limited; no sign-in required.
Identifiers
- Catalog ID
- tu_GTEx_calculate_eqtl
- Tool name
- GTEx_calculate_eqtl
- Added
- 2026-04-30 22:47Z
- Tags
- tooluniverse