Back to catalog
Research tool·structure·genome_nexus
GenomeNexus Get Canonical Transcript
Get the canonical transcript for a gene from Genome Nexus (MSK). Returns the Ensembl transcript ID, protein ID, protein length, RefSeq mRNA ID, CCDS ID, HUGO symbol, and Pfam protein domain annotations. Useful for determining the standard transcript to use for variant annotation, and for getting a quick overview of protein domain architecture. Input is a HUGO gene symbol (e.g., 'TP53', 'BRAF', 'BRCA1').
AvailableCortexa
Schema
JSON Schema the agent (or your API call) must match.
View JSON schemaExpandCollapse
JSON · 12 lines · 227 chars
Examples (1)
Default GenomeNexus Get Canonical Transcript call
Public-safe example · rate-limited
JSON input · 3 lines · 27 chars
Expected response keys: success
Identifiers
- Catalog ID
- tu_GenomeNexus_get_canonical_transcript
- Tool name
- GenomeNexus_get_canonical_transcript
- Added
- 2026-04-30 22:47Z
- Tags
- tooluniverse