Cortexa research tool·genomics·hocomoco

HOCOMOCO Search Motifs

Search HOCOMOCO v14 for transcription factor binding motifs by gene or protein name. Returns motif IDs, quality scores, consensus sequences, and TF classification. HOCOMOCO contains high-quality TF binding models derived from ChIP-Seq data for human and mouse. Complementary to JASPAR. Example: query 'TP53' returns P53.H14CORE.0.P.B with consensus sequence and quality grade.

Livelast probed 2026-04-30 23:07Z· 90msCortexa

Status

The most recent probe succeeded. Safe to call from the agent today.

Last probed: 1d ago
Last success: 1d ago
Last latency: 90ms

Schema

JSON Schema the agent (or your API call) must match.

{
  "properties": {
    "query": {
      "description": "Gene symbol or protein name to search for TF binding motifs. Examples: 'TP53', 'CTCF', 'STAT3', 'SOX2', 'MYC'.",
      "type": "string"
    }
  },
  "required": [
    "query"
  ],
  "type": "object"
}

Examples (1)

Default HOCOMOCO Search Motifs call

public-safeinput

{
  "query": "BRCA1"
}

Expected response keys: success

Anonymous-safe example. Rate-limited; no sign-in required.

Identifiers

Catalog ID: tu_HOCOMOCO_search_motifs
Tool name: HOCOMOCO_search_motifs
Added: 2026-04-30 22:47Z
Tags: tooluniverse

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