Cortexa research tool·genomics·harmonizome

Harmonizome Search Genes

Search for genes by keyword in Harmonizome (Ma'ayan Lab). Returns matching gene symbols that can be used with Harmonizome_get_gene for detailed information. Note: Harmonizome API does not support server-side text filtering; this endpoint returns a paginated list from the gene catalog. Use Harmonizome_search with entity_type='gene' for keyword-based gene search.

Livelast probed 2026-05-01 01:00Z· 320msCortexa

Status

The most recent probe succeeded. Safe to call from the agent today.

Last probed: 1d ago
Last success: 1d ago
Last latency: 320ms

Schema

JSON Schema the agent (or your API call) must match.

{
  "properties": {
    "limit": {
      "description": "Maximum results to return (default: 20).",
      "type": "integer"
    },
    "query": {
      "description": "Search keyword. Examples: 'kinase', 'tumor suppressor', 'receptor'.",
      "type": "string"
    }
  },
  "required": [
    "query"
  ],
  "type": "object"
}

Examples (1)

Default Harmonizome Search Genes call

public-safeinput

{
  "limit": 3,
  "query": "BRCA1"
}

Expected response keys: success

Anonymous-safe example. Rate-limited; no sign-in required.

Identifiers

Catalog ID: tu_Harmonizome_search_genes
Tool name: Harmonizome_search_genes
Added: 2026-05-01 00:58Z
Tags: tooluniverse

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