Cortexa research tool·genomics·humanmine

HumanMine Search Pathways

Search HumanMine specifically for biological pathways by name or identifier. Integrates pathway data from Reactome, KEGG, and other sources. Returns pathway names, identifiers (Reactome IDs like R-HSA-109581), and associated organisms. Useful for finding pathway IDs for downstream enrichment analysis.

Livelast probed 2026-04-30 23:07Z· 111msCortexa

Status

The most recent probe succeeded. Safe to call from the agent today.

Last probed: 1d ago
Last success: 1d ago
Last latency: 111ms

Schema

JSON Schema the agent (or your API call) must match.

{
  "properties": {
    "q": {
      "description": "Pathway search query: pathway name (e.g., 'apoptosis', 'cell cycle', 'PI3K-Akt signaling'), or Reactome ID",
      "type": "string"
    },
    "size": {
      "description": "Maximum number of results to return (default 10, max 100)",
      "type": [
        "integer",
        "null"
      ]
    }
  },
  "required": [
    "q"
  ],
  "type": "object"
}

Examples (1)

Default HumanMine Search Pathways call

public-safeinput

{
  "q": ""
}

Expected response keys: success

Anonymous-safe example. Rate-limited; no sign-in required.

Identifiers

Catalog ID: tu_HumanMine_search_pathways
Tool name: HumanMine_search_pathways
Added: 2026-04-30 22:47Z
Tags: tooluniverse

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