LitVar Get Variant Details
Get the full structured variant record from NCBI LitVar2 by rsID (the 'variant/get' endpoint, WITHOUT the publications list). Given a dbSNP rsID, returns a single normalized record combining: ClinGen canonical allele IDs (CA...), associated gene(s), variant name and HGVS notation, genomic chromosome:position (data_chromosome_base_position), allele, SNP class (e.g. snv), species and NCBI tax id, the literature-derived clinical-significance set (data_clinical_significance), and, when available, A…
Overview
Get the full structured variant record from NCBI LitVar2 by rsID (the 'variant/get' endpoint, WITHOUT the publications list). Given a dbSNP rsID, returns a single normalized record combining: ClinGen canonical allele IDs (CA...), associated gene(s), variant name and HGVS notation, genomic chromosome:position (data_chromosome_base_position), allele, SNP class (e.g. snv), species and NCBI tax id, the literature-derived clinical-significance set (data_clinical_significance), and, when available, ALFA minor allele frequency (data_maf). This is the variant 'profile' record - use LitVar_get_variant_publications for the list of citing PMIDs, or LitVar_search_variants to find an rsID from a gene or HGVS query.
Schema
JSON Schema the agent (or your API call) must match.
View JSON schemaExpandCollapse
Examples (1)
Default LitVar Get Variant Details call
Public-safe example · rate-limited
Identifiers
- Catalog ID
- tu_LitVar_get_variant_details
- Tool name
- LitVar_get_variant_details
- Added
- 2026-07-29 18:13Z
- Tags
- tooluniverse