MEME Fimo Scan

Scan DNA sequences for transcription factor (TF) binding motifs using FIMO (Find Individual Motif Occurrences) from the MEME Suite. Provide sequences in FASTA format and a motif in MEME format, and FIMO returns all statistically significant binding sites with p-values, scores, strand, and matched sequences. Ideal for scanning promoter regions for known TF binding sites from JASPAR or HOCOMOCO. Note: this submits a job to meme-suite.org and polls for results (typically 10-30 seconds).