MGnify Get Samples
List biological SAMPLES in MGnify (EBI Metagenomics) with full geographic/host/environment provenance. Returns each sample's accession, BioSample id, latitude, longitude, geo-loc-name, collection-date, host-tax-id, species, and ENVO environment biome/feature/material - the sample-level metadata table that the study, analysis, genome, and biome tools never expose. Pass a single 'sample_accession' (e.g. 'SRS10016989') to fetch one sample, or omit it to page through samples optionally filtered by…
Overview
List biological SAMPLES in MGnify (EBI Metagenomics) with full geographic/host/environment provenance. Returns each sample's accession, BioSample id, latitude, longitude, geo-loc-name, collection-date, host-tax-id, species, and ENVO environment biome/feature/material - the sample-level metadata table that the study, analysis, genome, and biome tools never expose. Pass a single 'sample_accession' (e.g. 'SRS10016989') to fetch one sample, or omit it to page through samples optionally filtered by 'study_accession' or 'biome'. No API key required.
Schema
JSON Schema the agent (or your API call) must match.
View JSON schemaExpandCollapse
Examples (1)
Default MGnify Get Samples call
Public-safe example · rate-limited
Identifiers
- Catalog ID
- tu_MGnify_get_samples
- Tool name
- MGnify_get_samples
- Added
- 2026-07-29 18:13Z
- Tags
- tooluniverse