Cortexa research tool·biomedical·mgnify

MGnify Search Studies

Search MGnify metagenomics/microbiome studies by biome or keyword. Returns study accessions (MGYS...), names, bioproject IDs, biome names, and analysis counts. Use to find datasets from specific environments (e.g., gut microbiome, soil, ocean) before retrieving analyses or taxonomy. Example: biome='root:Host-associated' returns gut, skin, and oral studies.

Livelast probed 2026-04-30 23:07Z· 2024msCortexa

Status

The most recent probe succeeded. Safe to call from the agent today.

Last probed: 1d ago
Last success: 1d ago
Last latency: 2024ms

Schema

JSON Schema the agent (or your API call) must match.

{
  "properties": {
    "biome": {
      "description": "Biome identifier (e.g., 'root:Host-associated').",
      "type": "string"
    },
    "search": {
      "description": "Keyword to search in study titles/descriptions.",
      "type": "string"
    },
    "size": {
      "default": 10,
      "description": "Number of records per page (1–100).",
      "maximum": 100,
      "minimum": 1,
      "type": "integer"
    }
  },
  "type": "object"
}

Examples (1)

Default MGnify Search Studies call

public-safeinput

{
  "size": 1
}

Expected response keys: success

Anonymous-safe example. Rate-limited; no sign-in required.

Identifiers

Catalog ID: tu_MGnify_search_studies
Tool name: MGnify_search_studies
Added: 2026-04-30 22:47Z
Tags: tooluniverse

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