MetaboAnalyst Biomarker Enrichment
Find statistically enriched metabolite sets (biomarker panels) from a list of metabolites. Tests input metabolites against curated metabolite set libraries derived from SMPDB and HMDB, including glycolysis, TCA cycle, urea cycle, amino acid metabolism, fatty acid pathways, purine/pyrimidine metabolism, glutathione metabolism, tryptophan metabolism, bile acid biosynthesis, ketone body metabolism, pentose phosphate pathway, sphingolipid metabolism, and more. Uses hypergeometric test with Benjamin…
Overview
Find statistically enriched metabolite sets (biomarker panels) from a list of metabolites. Tests input metabolites against curated metabolite set libraries derived from SMPDB and HMDB, including glycolysis, TCA cycle, urea cycle, amino acid metabolism, fatty acid pathways, purine/pyrimidine metabolism, glutathione metabolism, tryptophan metabolism, bile acid biosynthesis, ketone body metabolism, pentose phosphate pathway, sphingolipid metabolism, and more. Uses hypergeometric test with Benjamini-Hochberg FDR correction. Use for: identifying which biochemical processes or biomarker panels are represented in a metabolite list.
Status
The most recent probe succeeded. Safe to call from the agent today.
- Last probed
- 1d ago
- Last success
- 1d ago
- Last latency
- 112ms
Schema
JSON Schema the agent (or your API call) must match.
{
"properties": {
"metabolites": {
"description": "List of metabolite names to test for set enrichment. Example: ['glucose', 'pyruvate', 'lactate', 'alanine', 'glycine']",
"items": {
"type": "string"
},
"type": "array"
}
},
"required": [
"metabolites"
],
"type": "object"
}Examples (1)
Default MetaboAnalyst Biomarker Enrichment call
{
"metabolites": []
}Anonymous-safe example. Rate-limited; no sign-in required.
Identifiers
- Catalog ID
- tu_MetaboAnalyst_biomarker_enrichment
- Tool name
- MetaboAnalyst_biomarker_enrichment
- Added
- 2026-04-30 22:47Z
- Tags
- tooluniverse