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Cortexa research tool·genomics·ncbi_sra
NCBI SRA Search Runs
Search NCBI Sequence Read Archive (SRA) for NGS/RNA-seq sequencing runs by study accession, organism, sequencing strategy (RNA-Seq, WGS, ChIP-Seq), platform (ILLUMINA, OXFORD_NANOPORE), or library source. Returns SRA UIDs which can be used with other SRA tools to retrieve metadata and download links. Essential for discovering high-throughput sequencing data from public repositories. Use this to find relevant sequencing experiments before accessing the actual FASTQ data files.
AvailableCortexa
Schema
JSON Schema the agent (or your API call) must match.
JSON · 50 lines · 1,833 chars
Examples (1)
Default NCBI SRA Search Runs call
public-safeinput
JSON · 4 lines · 36 chars
Expected response keys: success
Anonymous-safe example. Rate-limited; no sign-in required.
Identifiers
- Catalog ID
- tu_NCBI_SRA_search_runs
- Tool name
- NCBI_SRA_search_runs
- Added
- 2026-04-30 22:47Z
- Tags
- tooluniverse