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Cortexa research tool·genomics·neb_tm

NEB Tm Calculate

Calculate primer melting temperature (Tm) and annealing temperature (Ta) using the NEB Tm Calculator API. Uses thermodynamic nearest-neighbor calculations (SantaLucia 1998) with polymerase-specific salt corrections for accurate PCR temperature predictions. Supports all NEB DNA polymerases including Q5, Phusion, Taq, OneTaq, and custom buffer conditions. When two primers are provided, also calculates the recommended annealing temperature (Ta). Complements the local DNA_primer_design tool by prov…

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Overview

Calculate primer melting temperature (Tm) and annealing temperature (Ta) using the NEB Tm Calculator API. Uses thermodynamic nearest-neighbor calculations (SantaLucia 1998) with polymerase-specific salt corrections for accurate PCR temperature predictions. Supports all NEB DNA polymerases including Q5, Phusion, Taq, OneTaq, and custom buffer conditions. When two primers are provided, also calculates the recommended annealing temperature (Ta). Complements the local DNA_primer_design tool by providing manufacturer-validated Tm values. Common polymerase codes: 'q5-0' (Q5 High-Fidelity), 'phusion-0' (Phusion HF Buffer), 'taq-0' (Taq Standard Buffer), 'onetaq-0' (OneTaq Standard Buffer). Use NEB_Tm_list_polymerases to see all available product codes.

Schema

JSON Schema the agent (or your API call) must match.

JSON · 40 lines · 1,454 chars

Examples (1)

Default NEB Tm Calculate call

public-safeinput
JSON · 3 lines · 27 chars
Expected response keys: success

Anonymous-safe example. Rate-limited; no sign-in required.

Identifiers

Catalog ID
tu_NEB_Tm_calculate
Tool name
NEB_Tm_calculate
Added
2026-05-01 00:58Z
Tags
tooluniverse
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