OmniPath Get Cell Communication Annotations
Get cell-cell communication annotations for proteins from databases like CellPhoneDB, CellChatDB, CellTalkDB, ICELLNET, and other curated resources integrated into OmniPath. Returns role classifications (ligand/receptor), signaling pathway assignments, categories (Secreted Signaling, Cell-Cell Contact, ECM-Receptor), and other cell communication metadata. Useful for understanding the functional context of proteins in intercellular signaling. Example: TGFB1 (P01137) is annotated as 'ligand' in C…
Overview
Get cell-cell communication annotations for proteins from databases like CellPhoneDB, CellChatDB, CellTalkDB, ICELLNET, and other curated resources integrated into OmniPath. Returns role classifications (ligand/receptor), signaling pathway assignments, categories (Secreted Signaling, Cell-Cell Contact, ECM-Receptor), and other cell communication metadata. Useful for understanding the functional context of proteins in intercellular signaling. Example: TGFB1 (P01137) is annotated as 'ligand' in CellChatDB pathway 'TGFb' category 'Secreted Signaling'; TGFBR2 (P37173) is annotated as 'receptor' in multiple pathways.
Schema
JSON Schema the agent (or your API call) must match.
Examples (1)
Default OmniPath Get Cell Communication Annotations call
Anonymous-safe example. Rate-limited; no sign-in required.
Identifiers
- Catalog ID
- tu_OmniPath_get_cell_communication_annotations
- Tool name
- OmniPath_get_cell_communication_annotations
- Added
- 2026-04-30 22:47Z
- Tags
- tooluniverse