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Research tool·genomics·omnipath

OmniPath Get Dorothea Regulon

Get the complete DoRothEA regulon for a transcription factor from OmniPath. Returns all target genes with mode of regulation (MoR: +1=activation, -1=repression), DoRothEA confidence levels, and source databases. Optionally filter by confidence levels (A, B, C). DoRothEA is the standard resource for TF activity estimation in tools like VIPER, decoupleR, and PROGENy. Use for: TF regulon retrieval for activity scoring, network analysis.

AvailableCortexa

Schema

JSON Schema the agent (or your API call) must match.

View JSON schemaExpandCollapse
JSON · 19 lines · 475 chars

Examples (1)

Default OmniPath Get Dorothea Regulon call

Public-safe example · rate-limited

JSON input · 3 lines · 23 chars
Expected response keys: success

Identifiers

Catalog ID
tu_OmniPath_get_dorothea_regulon
Tool name
OmniPath_get_dorothea_regulon
Added
2026-05-01 00:58Z
Tags
tooluniverse
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