Cortexa research tool·genomics·oxo

OxO Search Ontology Mappings

Search for cross-reference mappings for multiple ontology terms at once using the EBI OxO service. Supports batch queries to map multiple terms across biomedical ontologies. Can filter by target ontology prefix (e.g., only return MeSH mappings). Example: mapping HP:0001250 and HP:0001263 simultaneously returns MeSH, SNOMED-CT, and UMLS equivalents for both seizure-related phenotypes.

Livelast probed 2026-04-30 23:07Z· 113msCortexa

Status

The most recent probe succeeded. Safe to call from the agent today.

Last probed: 1d ago
Last success: 1d ago
Last latency: 113ms

Schema

JSON Schema the agent (or your API call) must match.

{
  "properties": {
    "distance": {
      "default": 1,
      "description": "Maximum mapping distance (1-3). Default: 1.",
      "type": "integer"
    },
    "target_prefix": {
      "description": "Filter mappings to a specific ontology prefix. Examples: 'MeSH' (Medical Subject Headings), 'SNOMEDCT' (clinical terms), 'UMLS' (unified medical language), 'ICD10' (diagnostic codes), 'OMIM' (genetic disorders).",
      "type": "string"
    },
    "term_ids": {
      "description": "Comma-separated list of ontology term IDs to map. Examples: 'HP:0001250,HP:0001263' (seizures and delayed motor development), 'DOID:9352,DOID:162' (T2DM and cancer).",
      "type": "string"
    }
  },
  "required": [
    "term_ids"
  ],
  "type": "object"
}

Examples (1)

Default OxO Search Ontology Mappings call

public-safeinput

{
  "distance": 1,
  "term_ids": ""
}

Expected response keys: success

Anonymous-safe example. Rate-limited; no sign-in required.

Identifiers

Catalog ID: tu_OxO_search_ontology_mappings
Tool name: OxO_search_ontology_mappings
Added: 2026-04-30 22:47Z
Tags: tooluniverse

OxO Search Ontology Mappings

Livelast probed 2026-04-30 23:07Z· 113msCortexa

Schema

JSON Schema the agent (or your API call) must match.

{ "properties": { "distance": { "default": 1, "description": "Maximum mapping distance (1-3). Default: 1.", "type": "integer" }, "target_prefix": { "description": "Filter mappings to a specific ontology prefix. Examples: 'MeSH' (Medical Subject Headings), 'SNOMEDCT' (clinical terms), 'UMLS' (unified medical language), 'ICD10' (diagnostic codes), 'OMIM' (genetic disorders).", "type": "string" }, "term_ids": { "description": "Comma-separated list of ontology term IDs to map. Examples: 'HP:0001250,HP:0001263' (seizures and delayed motor development), 'DOID:9352,DOID:162' (T2DM and cancer).", "type": "string" } }, "required": [ "term_ids" ], "type": "object" }