PDBeSIFTS Get Scop Mapping
Get the SCOP (Structural Classification of Proteins) structural classification for a PDB entry from PDBe SIFTS. Returns the SCOP hierarchy - class (e.g., 'All beta proteins'), fold (e.g., 'Lipocalins'), superfamily, SCCS code, and SCOP domain identifier - together with per-chain residue-range mappings showing which residues of each chain form each SCOP domain. SCOP classifies protein domains by evolutionary and structural relationships; this fold/superfamily information is otherwise absent from…
Overview
Get the SCOP (Structural Classification of Proteins) structural classification for a PDB entry from PDBe SIFTS. Returns the SCOP hierarchy - class (e.g., 'All beta proteins'), fold (e.g., 'Lipocalins'), superfamily, SCCS code, and SCOP domain identifier - together with per-chain residue-range mappings showing which residues of each chain form each SCOP domain. SCOP classifies protein domains by evolutionary and structural relationships; this fold/superfamily information is otherwise absent from Cortexa Tool Mesh. Use to determine the structural fold class of a crystal/EM structure and locate the domain boundaries per chain. Example: 1cbs -> SCOP sunid 50847, class 'All beta proteins', fold 'Lipocalins', superfamily 'Lipocalins', SCCS 'b.60.1.2', chain A residues 1-137.
Schema
JSON Schema the agent (or your API call) must match.
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Examples (1)
Default PDBeSIFTS Get Scop Mapping call
Public-safe example · rate-limited
Identifiers
- Catalog ID
- tu_PDBeSIFTS_get_scop_mapping
- Tool name
- PDBeSIFTS_get_scop_mapping
- Added
- 2026-07-29 18:13Z
- Tags
- tooluniverse