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Cortexa research tool·structure·pdbe_graph

PDBe Get Uniprot Mappings

Get UniProt-to-PDB chain mappings for a PDB structure from the PDBe Graph API. For each UniProt accession represented in the structure, returns all chain mappings with residue-level alignment (UniProt start/end, PDB start/end, identity, coverage). Essential for understanding which proteins are in a crystal structure and how they map to UniProt reference sequences. Example: 4HHB returns P69905 (HBA_HUMAN) mapped to chains A,C and P68871 (HBB_HUMAN) mapped to chains B,D.

AvailableCortexa

Schema

JSON Schema the agent (or your API call) must match.

JSON · 12 lines · 266 chars

Examples (1)

Default PDBe Get Uniprot Mappings call

public-safeinput
JSON · 3 lines · 22 chars
Expected response keys: success

Anonymous-safe example. Rate-limited; no sign-in required.

Identifiers

Catalog ID
tu_PDBe_get_uniprot_mappings
Tool name
PDBe_get_uniprot_mappings
Added
2026-04-30 22:47Z
Tags
tooluniverse
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