PDC Get Gene Protein
Get protein information and proteomics study coverage for a gene from the NCI Proteomics Data Commons (PDC). Given a gene symbol (e.g., TP53, EGFR, MYC), returns the gene description, NCBI gene ID, HGNC authority, associated protein accessions (UniProt, RefSeq, Ensembl), and spectral count data across all PDC studies where the protein was detected. Spectral counts indicate protein abundance evidence in each study. Useful for understanding which cancer proteomics datasets have measured a specifi…
Overview
Get protein information and proteomics study coverage for a gene from the NCI Proteomics Data Commons (PDC). Given a gene symbol (e.g., TP53, EGFR, MYC), returns the gene description, NCBI gene ID, HGNC authority, associated protein accessions (UniProt, RefSeq, Ensembl), and spectral count data across all PDC studies where the protein was detected. Spectral counts indicate protein abundance evidence in each study. Useful for understanding which cancer proteomics datasets have measured a specific protein.
Status
The most recent probe succeeded. Safe to call from the agent today.
- Last probed
- 1d ago
- Last success
- 1d ago
- Last latency
- 97ms
Schema
JSON Schema the agent (or your API call) must match.
{
"properties": {
"gene_name": {
"description": "Gene symbol to look up (e.g., 'TP53', 'EGFR', 'BRCA1', 'MYC')",
"type": "string"
},
"operation": {
"description": "Operation type",
"enum": [
"get_gene_protein"
],
"type": "string"
}
},
"required": [
"operation",
"gene_name"
],
"type": "object"
}Examples (1)
Default PDC Get Gene Protein call
{
"gene_name": "BRCA1",
"operation": ""
}Anonymous-safe example. Rate-limited; no sign-in required.
Identifiers
- Catalog ID
- tu_PDC_get_gene_protein
- Tool name
- PDC_get_gene_protein
- Added
- 2026-04-30 22:47Z
- Tags
- tooluniverse