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Cortexa research tool·structure·pathwaycommons
PathwayCommons Get Neighborhood
Get the interaction neighborhood for a gene from Pathway Commons. Returns all known interactions (protein-protein, regulatory, catalytic, complex membership) for the query gene from 22 integrated databases. Each interaction includes the partner gene, interaction type (interacts-with, controls-state-change-of, controls-expression-of, in-complex-with, etc.), data source, and PubMed references. Useful for building gene interaction networks and finding functional partners.
AvailableCortexa
Schema
JSON Schema the agent (or your API call) must match.
JSON · 39 lines · 893 chars
Examples (1)
Default PathwayCommons Get Neighborhood call
public-safeinput
JSON · 3 lines · 21 chars
Expected response keys: success
Anonymous-safe example. Rate-limited; no sign-in required.
Identifiers
- Catalog ID
- tu_PathwayCommons_get_neighborhood
- Tool name
- PathwayCommons_get_neighborhood
- Added
- 2026-04-30 22:47Z
- Tags
- tooluniverse