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Research tool·chemistry·pathwaycommons

PathwayCommons Search

Search Pathway Commons for pathways, interactions, and molecular entities across 22 integrated databases (Reactome, KEGG, WikiPathways, PID, BioGRID, IntAct, HPRD, etc.). Search by gene symbol, protein name, or keyword. Optionally filter by BioPAX entity type (Pathway, Protein, SmallMolecule, Complex) and data source. Returns pathway URIs, names, data sources, and participant/process counts. Use PathwayCommons_get_pathway with returned URI for full pathway details.

AvailableCortexa

Schema

JSON Schema the agent (or your API call) must match.

View JSON schemaExpandCollapse
JSON · 52 lines · 1,219 chars

Examples (1)

Default PathwayCommons Search call

Public-safe example · rate-limited

JSON input · 6 lines · 79 chars
Expected response keys: success

Identifiers

Catalog ID
tu_PathwayCommons_search
Tool name
PathwayCommons_search
Added
2026-04-30 22:47Z
Tags
tooluniverse
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