Pfam Get Family Proteomes
Get the proteome (organism) distribution for a Pfam protein family. Returns the list of reference proteomes that contain proteins with this Pfam domain, including organism names, taxonomy IDs, and whether the proteome is a reference proteome. This reveals the taxonomic distribution of a domain across the tree of life. For example, PF00001 (7tm_1 GPCR) is found in 1,890 proteomes spanning from early-diverging animals to humans, while PF00076 (RRM_1 RNA recognition motif) is in 6,831 proteomes. U…
Overview
Get the proteome (organism) distribution for a Pfam protein family. Returns the list of reference proteomes that contain proteins with this Pfam domain, including organism names, taxonomy IDs, and whether the proteome is a reference proteome. This reveals the taxonomic distribution of a domain across the tree of life. For example, PF00001 (7tm_1 GPCR) is found in 1,890 proteomes spanning from early-diverging animals to humans, while PF00076 (RRM_1 RNA recognition motif) is in 6,831 proteomes. Use this to understand the evolutionary spread of a protein domain.
Status
The most recent probe succeeded. Safe to call from the agent today.
- Last probed
- 1d ago
- Last success
- 1d ago
- Last latency
- 588ms
Schema
JSON Schema the agent (or your API call) must match.
{
"properties": {
"max_results": {
"default": 20,
"description": "Maximum number of proteomes to return (default 20, max 100).",
"type": "integer"
},
"pfam_accession": {
"description": "Pfam family accession. Examples: 'PF00001' (7tm_1, found in 1890 proteomes), 'PF00076' (RRM_1, 6831 proteomes), 'PF00069' (Pkinase).",
"type": "string"
}
},
"required": [
"pfam_accession"
],
"type": "object"
}Examples (1)
Default Pfam Get Family Proteomes call
{
"max_results": 1,
"pfam_accession": "P38398"
}Anonymous-safe example. Rate-limited; no sign-in required.
Identifiers
- Catalog ID
- tu_Pfam_get_family_proteomes
- Tool name
- Pfam_get_family_proteomes
- Added
- 2026-05-01 00:58Z
- Tags
- tooluniverse