PharmacoDB Get Experiments

Overview

Get drug sensitivity experiments from PharmacoDB with dose-response curves and pharmacological profiles. Returns experiment data including raw dose-response measurements and fitted parameters (IC50, EC50, AAC, Hill slope, Einf, DSS1/2/3). Filter by compound name, cell line name, and/or dataset. Integrates data from CCLE, CTRPv2, FIMM, GDSC1, GDSC2, GRAY, NCI60, PRISM, UHNBreast, and gCSI. Essential for comparing drug sensitivity across cell lines and datasets. Example: get Paclitaxel dose-response data across all cell lines.

Status

The most recent probe succeeded. Safe to call from the agent today.

Last probed

1d ago

Last success

1d ago

Last latency

96ms

Schema

JSON Schema the agent (or your API call) must match.

{
  "properties": {
    "cell_line_name": {
      "description": "Cell line name to filter experiments (e.g., 'MCF-7', 'A549')",
      "type": [
        "string",
        "null"
      ]
    },
    "compound_name": {
      "description": "Compound/drug name to filter experiments (e.g., 'Paclitaxel', 'Erlotinib')",
      "type": [
        "string",
        "null"
      ]
    },
    "dataset_name": {
      "description": "Dataset name to filter (e.g., 'GDSC1', 'CCLE', 'CTRPv2', 'PRISM')",
      "type": [
        "string",
        "null"
      ]
    },
    "operation": {
      "description": "Operation type",
      "enum": [
        "get_experiments"
      ],
      "type": "string"
    },
    "per_page": {
      "default": 10,
      "description": "Number of experiments to return per page (default 10, max 100)",
      "maximum": 100,
      "minimum": 1,
      "type": "integer"
    }
  },
  "required": [
    "operation"
  ],
  "type": "object"
}

Examples (1)

{
  "operation": "",
  "per_page": 1
}

Identifiers

Catalog ID

tu_PharmacoDB_get_experiments

Tool name

PharmacoDB_get_experiments

Added

2026-05-01 00:58Z

Tags

tooluniverse