Cortexa research tool·physics astro·popgen

PopGen Inbreeding

Compute inbreeding coefficient F for a known pedigree type over one or more generations. Supports: self, full-sib, half-sib, first-cousin, double-first-cousin, uncle-niece, aunt-nephew, half-first-cousin, second-cousin. Uses the recurrence F_t = base_F + (1-base_F)*F_{t-1} for iterated inbreeding. Reports F per generation, cumulative F, and retained heterozygosity.

Livelast probed 2026-05-01 01:00Z· 97msCortexa

Status

The most recent probe succeeded. Safe to call from the agent today.

Last probed: 1d ago
Last success: 1d ago
Last latency: 97ms

Schema

JSON Schema the agent (or your API call) must match.

{
  "properties": {
    "generations": {
      "description": "Number of successive inbreeding generations (default 1)",
      "type": "integer"
    },
    "operation": {
      "description": "Operation type",
      "enum": [
        "inbreeding"
      ],
      "type": "string"
    },
    "pedigree": {
      "description": "Pedigree type (e.g., 'half-sib', 'first-cousin', 'full-sib')",
      "type": "string"
    }
  },
  "required": [
    "operation",
    "pedigree"
  ],
  "type": "object"
}

Examples (1)

Default PopGen Inbreeding call

public-safeinput

{
  "generations": 1,
  "operation": "",
  "pedigree": ""
}

Expected response keys: success

Anonymous-safe example. Rate-limited; no sign-in required.

Identifiers

Catalog ID: tu_PopGen_inbreeding
Tool name: PopGen_inbreeding
Added: 2026-05-01 00:58Z
Tags: tooluniverse

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