ProteinsPlus Generate Interaction Diagram

Overview

Generate 2D protein-ligand interaction diagrams using PoseView. Creates publication-quality visualizations showing detailed interactions between proteins and small molecules including hydrogen bonds, hydrophobic contacts, pi-stacking, and salt bridges. Input requires a PDB ID and ligand identifier. Returns interaction diagrams in multiple formats (PNG, PDF, SVG) suitable for publications, presentations, and reports. Essential for visualizing and communicating binding mode analysis, structure-activity relationships, and molecular recognition patterns in drug discovery projects. Example: Generate interaction diagram for 1KZK with ligand JE2_A_701 to visualize kinase inhibitor binding mode.

Status

The most recent probe succeeded. Safe to call from the agent today.

Last probed

1d ago

Last success

1d ago

Last latency

98ms

Schema

JSON Schema the agent (or your API call) must match.

{
  "properties": {
    "ligand": {
      "description": "Ligand identifier in format 'residue_name_residue_chain_residue_number' (e.g., 'JE2_A_701'). Required.",
      "type": "string"
    },
    "pdb_id": {
      "description": "PDB identifier (e.g., '1KZK', '2OZR', '4HHB'). Required.",
      "type": "string"
    }
  },
  "required": [
    "pdb_id",
    "ligand"
  ],
  "type": "object"
}

Examples (1)

{
  "ligand": "",
  "pdb_id": "1AKI"
}

Identifiers

Catalog ID

tu_ProteinsPlus_generate_interaction_diagram

Tool name

ProteinsPlus_generate_interaction_diagram

Added

2026-04-30 22:47Z

Tags

tooluniverse