ProteomicsDB Get Expression Summary

Overview

Get a tissue expression summary for a protein from ProteomicsDB, showing the top tissues/cell lines/fluids ranked by MS-based expression level. Given a UniProt accession, returns the top N biological sources where the protein is most highly expressed (by iBAQ quantification), along with total counts of tissues, cell lines, and body fluids where the protein was detected. Useful for quickly identifying which tissues/cell lines express a protein most abundantly based on mass spectrometry evidence. Complements antibody-based tissue expression from HPA.

Status

The most recent probe succeeded. Safe to call from the agent today.

Last probed

1d ago

Last success

1d ago

Last latency

94ms

Schema

JSON Schema the agent (or your API call) must match.

{
  "properties": {
    "operation": {
      "description": "Operation type",
      "enum": [
        "get_expression_summary"
      ],
      "type": "string"
    },
    "top_n": {
      "description": "Number of top tissues to return, ranked by expression level (default: 10)",
      "type": "integer"
    },
    "uniprot_id": {
      "description": "UniProt accession for the protein (e.g., 'P04637' for TP53, 'P00533' for EGFR)",
      "type": "string"
    }
  },
  "required": [
    "operation",
    "uniprot_id"
  ],
  "type": "object"
}

Examples (1)

{
  "operation": "",
  "top_n": 1,
  "uniprot_id": ""
}

Identifiers

Catalog ID

tu_ProteomicsDB_get_expression_summary

Tool name

ProteomicsDB_get_expression_summary

Added

2026-04-30 22:47Z

Tags

tooluniverse