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Cortexa research tool·structure·pubchem
PubChem Search Compounds By Substructure
Search for CIDs in PubChem that contain the given substructure (SMILES). Returns up to max_results CIDs (default 10).
Livelast probed 2026-04-30 23:07Z· 100msCortexa
Status
The most recent probe succeeded. Safe to call from the agent today.
- Last probed
- 1d ago
- Last success
- 1d ago
- Last latency
- 100ms
Schema
JSON Schema the agent (or your API call) must match.
{
"properties": {
"max_results": {
"default": 10,
"description": "Maximum number of CIDs to return (default: 10, max: 10000).",
"type": "integer"
},
"smiles": {
"description": "SMILES of substructure (e.g., \"c1ccccc1\" corresponds to benzene ring).",
"type": "string"
}
},
"required": [
"smiles"
],
"type": "object"
}Examples (1)
Default PubChem Search Compounds By Substructure call
public-safeinput
{
"max_results": 1,
"smiles": "CC(=O)Oc1ccccc1C(=O)O"
}Expected response keys: success
Anonymous-safe example. Rate-limited; no sign-in required.
Identifiers
- Catalog ID
- tu_PubChem_search_compounds_by_substructure
- Tool name
- PubChem_search_compounds_by_substructure
- Added
- 2026-04-30 22:47Z
- Tags
- tooluniverse