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Cortexa research tool·structure·rcsb_advanced_search
RCSBAdvSearch Search By Motif
Search RCSB PDB for protein structures containing a specific sequence motif pattern. Supports PROSITE patterns, regular expressions, and simple patterns. Useful for finding structures with specific functional motifs like zinc fingers, kinase domains, or any sequence pattern of interest. Returns polymer entity identifiers (PDB_ID + entity number).
AvailableCortexa
Schema
JSON Schema the agent (or your API call) must match.
JSON · 24 lines · 824 chars
Examples (1)
Default RCSBAdvSearch Search By Motif call
public-safeinput
JSON · 4 lines · 32 chars
Expected response keys: success
Anonymous-safe example. Rate-limited; no sign-in required.
Identifiers
- Catalog ID
- tu_RCSBAdvSearch_search_by_motif
- Tool name
- RCSBAdvSearch_search_by_motif
- Added
- 2026-04-30 22:47Z
- Tags
- tooluniverse