Cortexa research tool·genomics·reactome_content

ReactomeContent Search

Search Reactome for pathways, reactions, and biological entities by keyword. Performs free-text search across Reactome's knowledge base of biological pathways. Supports filtering by species and entity type. Example: searching 'apoptosis' in Homo sapiens returns pathways like R-HSA-109581 (Apoptosis), R-HSA-169911 (Regulation of Apoptosis), R-HSA-9635465 (Suppression of apoptosis). Use this to discover relevant pathways before querying their details.

Livelast probed 2026-04-30 23:07Z· 97msCortexa

Status

The most recent probe succeeded. Safe to call from the agent today.

Last probed: 1d ago
Last success: 1d ago
Last latency: 97ms

Schema

JSON Schema the agent (or your API call) must match.

{
  "properties": {
    "query": {
      "description": "Search query. Examples: 'apoptosis', 'TP53', 'cell cycle', 'DNA repair', 'insulin signaling'.",
      "type": "string"
    },
    "species": {
      "default": "Homo sapiens",
      "description": "Species name for filtering results. Default: 'Homo sapiens'. Other options: 'Mus musculus', 'Rattus norvegicus', 'Danio rerio', 'Drosophila melanogaster'.",
      "type": "string"
    },
    "types": {
      "default": "Pathway",
      "description": "Entity type to search. Options: 'Pathway', 'Reaction', 'Complex', 'Protein', 'SmallMolecule'. Default: 'Pathway'.",
      "type": "string"
    }
  },
  "required": [
    "query"
  ],
  "type": "object"
}

Examples (1)

Default ReactomeContent Search call

public-safeinput

{
  "query": "BRCA1"
}

Expected response keys: success

Anonymous-safe example. Rate-limited; no sign-in required.

Identifiers

Catalog ID: tu_ReactomeContent_search
Tool name: ReactomeContent_search
Added: 2026-04-30 22:47Z
Tags: tooluniverse

ReactomeContent Search

Livelast probed 2026-04-30 23:07Z· 97msCortexa

Schema

JSON Schema the agent (or your API call) must match.

{ "properties": { "query": { "description": "Search query. Examples: 'apoptosis', 'TP53', 'cell cycle', 'DNA repair', 'insulin signaling'.", "type": "string" }, "species": { "default": "Homo sapiens", "description": "Species name for filtering results. Default: 'Homo sapiens'. Other options: 'Mus musculus', 'Rattus norvegicus', 'Danio rerio', 'Drosophila melanogaster'.", "type": "string" }, "types": { "default": "Pathway", "description": "Entity type to search. Options: 'Pathway', 'Reaction', 'Complex', 'Protein', 'SmallMolecule'. Default: 'Pathway'.", "type": "string" } }, "required": [ "query" ], "type": "object" }