Cortexa research tool·genomics·reactome

Reactome Query By Ids

Query Reactome by providing a list of Reactome stable identifiers (R-HSA-*). Returns detailed information about pathways, reactions, or other entities. Note: This endpoint requires Reactome stable IDs, not external IDs (UniProt, ChEBI). Use mapping endpoints first to convert external IDs to Reactome IDs.

Livelast probed 2026-04-30 23:07Z· 104msCortexa

Status

The most recent probe succeeded. Safe to call from the agent today.

Last probed: 1d ago
Last success: 1d ago
Last latency: 104ms

Schema

JSON Schema the agent (or your API call) must match.

{
  "properties": {
    "ids": {
      "description": "List of Reactome stable identifiers (e.g., 'R-HSA-73817', 'R-HSA-111289'). Must be Reactome stable IDs, not external IDs. To find pathway IDs, use Reactome_list_top_pathways. To find reaction IDs, use Reactome_get_pathway_reactions. To convert external IDs (UniProt) to Reactome IDs, first use Reactome_map_uniprot_to_pathways or Reactome_map_uniprot_to_reactions.",
      "items": {
        "type": "string"
      },
      "type": "array"
    },
    "species": {
      "description": "Optional: Filter by species using exact scientific name (e.g., 'Homo sapiens') or taxonomy ID. Common names like 'human' are not supported.",
      "type": "string"
    },
    "types": {
      "description": "Optional: Filter by types (e.g., ['Pathway', 'Reaction'])",
      "items": {
        "type": "string"
      },
      "type": "array"
    }
  },
  "required": [
    "ids"
  ],
  "type": "object"
}

Examples (1)

Default Reactome Query By Ids call

public-safeinput

{
  "ids": [],
  "types": []
}

Expected response keys: success

Anonymous-safe example. Rate-limited; no sign-in required.

Identifiers

Catalog ID: tu_Reactome_query_by_ids
Tool name: Reactome_query_by_ids
Added: 2026-04-30 22:47Z
Tags: tooluniverse

Reactome Query By Ids

Livelast probed 2026-04-30 23:07Z· 104msCortexa

Schema

JSON Schema the agent (or your API call) must match.

{ "properties": { "ids": { "description": "List of Reactome stable identifiers (e.g., 'R-HSA-73817', 'R-HSA-111289'). Must be Reactome stable IDs, not external IDs. To find pathway IDs, use Reactome_list_top_pathways. To find reaction IDs, use Reactome_get_pathway_reactions. To convert external IDs (UniProt) to Reactome IDs, first use Reactome_map_uniprot_to_pathways or Reactome_map_uniprot_to_reactions.", "items": { "type": "string" }, "type": "array" }, "species": { "description": "Optional: Filter by species using exact scientific name (e.g., 'Homo sapiens') or taxonomy ID. Common names like 'human' are not supported.", "type": "string" }, "types": { "description": "Optional: Filter by types (e.g., ['Pathway', 'Reaction'])", "items": { "type": "string" }, "type": "array" } }, "required": [ "ids" ], "type": "object" }