Cortexa research tool·genomics·scxa

SCXA List Experiments

List single-cell RNA-seq experiments from EBI Single Cell Expression Atlas. Returns 380+ curated scRNA-seq datasets with species, cell counts, technology (10x, Smart-seq2, Drop-seq), and experimental factors (cell type, tissue, disease). Filter by species or keyword. Covers Human Cell Atlas, GTEx, Tabula Sapiens, and more. Example: filtering by 'Homo sapiens' returns 159 experiments.

Livelast probed 2026-04-30 23:07Z· 657msCortexa

Status

The most recent probe succeeded. Safe to call from the agent today.

Last probed: 1d ago
Last success: 1d ago
Last latency: 657ms

Schema

JSON Schema the agent (or your API call) must match.

{
  "properties": {
    "keyword": {
      "description": "Keyword to search in experiment descriptions and factors (e.g., 'pancreas', 'brain', 'cancer', 'immune').",
      "type": "string"
    },
    "limit": {
      "default": 20,
      "description": "Maximum number of experiments to return (default 20, max 100).",
      "type": "integer"
    },
    "species": {
      "description": "Species name to filter by (e.g., 'Homo sapiens', 'Mus musculus', 'Drosophila melanogaster'). Case-insensitive.",
      "type": "string"
    }
  },
  "type": "object"
}

Examples (1)

Default SCXA List Experiments call

public-safeinput

{
  "limit": 3
}

Expected response keys: success

Anonymous-safe example. Rate-limited; no sign-in required.

Identifiers

Catalog ID: tu_SCXA_list_experiments
Tool name: SCXA_list_experiments
Added: 2026-04-30 22:47Z
Tags: tooluniverse

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