SYNERGxDB Get Biomarker Association
Pharmacogenomic biomarker discovery for drug combinations in SYNERGxDB: correlates per-cell-line gene expression (rnaseq FPKM) against the measured drug-combination synergy scores (Bliss, Loewe, HSA, ZIP) for a queried gene. Answers 'does expression of gene X track with combination synergy across cancer cell lines?'. Returns one row per cell line with that cell line's FPKM for the gene plus its synergy metrics. Pass the HGNC gene symbol via 'gene' (e.g., 'EGFR', 'BRAF'). Example: gene='EGFR' re…
Overview
Pharmacogenomic biomarker discovery for drug combinations in SYNERGxDB: correlates per-cell-line gene expression (rnaseq FPKM) against the measured drug-combination synergy scores (Bliss, Loewe, HSA, ZIP) for a queried gene. Answers 'does expression of gene X track with combination synergy across cancer cell lines?'. Returns one row per cell line with that cell line's FPKM for the gene plus its synergy metrics. Pass the HGNC gene symbol via 'gene' (e.g., 'EGFR', 'BRAF'). Example: gene='EGFR' returns rows like {fpkm:0, cellName:'A2058', bliss:-1.365, loewe:-0.259, hsa:-0.628, zip:-0.498}. An unknown gene returns an empty list with a message.
Schema
JSON Schema the agent (or your API call) must match.
View JSON schemaExpandCollapse
Examples (1)
Default SYNERGxDB Get Biomarker Association call
Public-safe example · rate-limited
Identifiers
- Catalog ID
- tu_SYNERGxDB_get_biomarker_association
- Tool name
- SYNERGxDB_get_biomarker_association
- Added
- 2026-07-29 18:13Z
- Tags
- tooluniverse